Publisher review:BrainMaps Analyze is a powerful tool for applying image analysis routines to BrainMaps.org high resolution BrainMaps Analyze is a powerful tool for applying image analysis routines to massive, high resolution brain image data at BrainMaps.org (or elsewhere)The thumbnail image is a screenshot of BrainMaps Analyze (Matlab version) performing granulometry analysis on this image. The top left image is a thumbnail of the mouse brain section. The top right image shows the average (over tiles) granulometry spectrum, showing prominent peaks for different sized cells. The bottom left image contains a plot of cell size (x axis) vs tile number (y axis).
The bottom right image is a plot of cell sizes, starting from radius equal to 1 pixel in the upper left, and incrementing by one in left to right, until it reaches radius of 36 pixels in the bottom right image. Note that the original image is over 22,000 pixels wide, and that the computation of granulometry was done on a per-image-tile basis, where each image tile is 256x256 pixels.The BrainMaps Analyze code can be readily extended to include any types of image analysis.
BrainMaps Analyze 0.15 is a Matlab script for Medical scripts design by Shawn Mikula.
It runs on following operating system: Windows / Linux / Mac OS / BSD / Solaris.
BrainMaps Analyze is a powerful tool for applying image analysis routines to BrainMaps.org high resolution
Operating system:Windows / Linux / Mac OS / BSD / Solaris
BrainMaps Analyze 0.15 script details 
